phylonetwork package
====================

phylonetwork module
-------------------

.. automodule:: phylonetwork
    :members:
    :undoc-members:
    :show-inheritance:

phylonetwork.tree_generators module
-----------------------------------


.. automodule:: phylonetwork.tree_generators
    :members:
    :undoc-members:
    :show-inheritance:

phylonetwork.btctc_generators module
------------------------------------


.. automodule:: phylonetwork.btctc_generators
    :members:
    :undoc-members:
    :show-inheritance:

phylonetwork.balances module
----------------------------


.. automodule:: phylonetwork.balances
    :members:
    :undoc-members:
    :show-inheritance:

phylonetwork.tree_operations module
-----------------------------------


.. automodule:: phylonetwork.tree_operations
    :members:
    :undoc-members:
    :show-inheritance:


phylonetwork.exceptions module
------------------------------


.. automodule:: phylonetwork.exceptions
    :members:
    :undoc-members:
    :show-inheritance:



phylonetwork.utils module
-------------------------


.. automodule:: phylonetwork.utils
    :members:
    :undoc-members:
    :show-inheritance:

.. rubric:: References

.. [CRV08] Cardona, G., Rosselló, F., & Valiente, G. (2008). Extended Newick: it is time for a standard representation of phylogenetic networks. BMC Bioinformatics, 9(1), 532. https://doi.org/10.1186/1471-2105-9-532